Category: Software 2012 Painful Experience on Building Local UCSC Genome Browser Nov 21 2012 Next-generation Sequencing Quality Control Tools Aug 21 2012 Tools for Cross-species Biological Network Comparison Jul 23 2012 String-graph Based Next-generation Sequencing Assemblers May 08 2012 [Paper] GAGE: A Critical Evaluation of Genome Assemblies and Assembly Algorithms Mar 01 2012 [Paper] De Novo Assembly and Genotyping of Variants Using Colored De Bruijn Graphs Jan 09 2012 2011 [Paper] Comparison of Lists of Genes Based on Functional Profiles Nov 13 2011 perl脚本提取BLAST结果中的信息【以tblastn为例】 Aug 27 2011 做生物信息常用到的linux命令 Aug 27 2011 [Paper]A Framework for Variation Discovery and Genotyping Using Next-generation DNA Sequencing Data May 22 2011 GATK: The Genome Analysis Toolkit May 22 2011 Notes on Using BLAST Mar 22 2011 MCL - a Cluster Algorithm for Graphs Mar 22 2011 MizBee: A Multiscale Synteny Browser Mar 21 2011 i-ADHoRe: Detect Synteny Regions Mar 21 2011 Software Packages for Whole Genome Alignment Feb 23 2011 Software Packages for Discovering Structural Variation With Next-generation Sequencing Feb 21 2011 本地blast Feb 17 2011 用perl操作Clustalw进行多序列比对 Feb 17 2011 Windows下用perl操作bl2seq进行两序列比对 Feb 17 2011 ABySS: A Parallel Assembler for Short Read Sequence Data Feb 17 2011
[Paper]A Framework for Variation Discovery and Genotyping Using Next-generation DNA Sequencing Data May 22 2011